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ENSEMBITS: an alphabet of protein conformational ensembles

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ENSEMBITS: an alphabet of protein conformational ensembles

·8 min read·Kaiwen Shi, Carlos Oliver

This paper addresses the limitation of existing protein structure tokenizers (PSTs) that only capture static local geometry but fail to encode protein dynamics reflected by conformational ensembles

researchprotein-dynamics-tokenizationvector-quantized-autoencoderpermutation-invariant-encodermolecular-dynamics

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EVA-Bench: A New End-to-end Framework for Evaluating Voice Agents

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EVA-Bench: A New End-to-end Framework for Evaluating Voice Agents

·8 min read·Tara Bogavelli, Gabrielle Gauthier Melançon, Katrina Stankiewicz et al.

EVA-Bench addresses critical gaps in evaluating voice agents by providing a comprehensive end-to-end framework that simultaneously tackles the challenges of realistic multi-turn conversation simula…

researchvoice-agent-evaluationbot-to-bot-simulationspoken-dialogue-systemsmulti-turn-conversation

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Force-Aware Neural Tangent Kernels for Scalable and Robust Active Learning of MLIPs

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Force-Aware Neural Tangent Kernels for Scalable and Robust Active Learning of MLIPs

·8 min read·Eszter Varga-Umbrich, Zachary Weller-Davies, Paul Duckworth et al.

This paper addresses crucial practical challenges in offline active learning for machine-learning interatomic potentials (MLIPs): scalability to large unlabeled candidate pools (~200k+ structures),…

researchactive-learningmachine-learning-interatomic-potentialsneural-tangent-kernelforce-aware-learning

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From DES to KiDS: Domain adaptation for cross-survey detection of low-surface-brightness galaxies

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From DES to KiDS: Domain adaptation for cross-survey detection of low-surface-brightness galaxies

·9 min read·Hareesh Thuruthipilly, Krzysztof Lisiecki, Junais et al.

This paper addresses the challenge of identifying low-surface-brightness galaxies (LSBGs) across heterogeneous astronomical imaging surveys, a key problem for large upcoming projects like LSST and …

researchdomain-adaptationlow-surface-brightness-galaxiescross-survey-transferdeep-learning

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Identifying AI Web Scrapers Using Canary Tokens

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Identifying AI Web Scrapers Using Canary Tokens

·7 min read·Steven Seiden, Triss Ren, Caroline Zhang et al.

This paper addresses the challenge of identifying which web scrapers feed data to large language models (LLMs) during real-time content retrieval, a poorly understood and important problem for webs…

researchweb-scraping-detectioncanary-tokensai-chatbotsscraper-attribution

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Interpretable Machine Learning for Antepartum Prediction of Pregnancy-Associated Thrombotic Microangiopathy Using Routine Longitudinal Laboratory Data

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Interpretable Machine Learning for Antepartum Prediction of Pregnancy-Associated Thrombotic Microangiopathy Using Routine Longitudinal Laboratory Data

·8 min read·Chuanchuan Sun, Zhen Yu, Qin Fan et al.

This study addresses the difficult problem of early antepartum prediction of pregnancy-associated thrombotic microangiopathy (P-TMA), a rare but life-threatening syndrome characterized by microvasc…

researchclinical-predictionlongitudinal-datainterpretable-mlgradient-boosting

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Measuring and Mitigating Toxicity in Large Language Models: A Comprehensive Replication Study

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Measuring and Mitigating Toxicity in Large Language Models: A Comprehensive Replication Study

·8 min read·Mokshit Surana, Archit Rathod, Akshaj Satishkumar

This study undertakes a comprehensive replication and extension of existing toxicity mitigation techniques for large language models (LLMs), specifically focusing on the inference-time method DExperts

researchtoxicity-mitigationlarge-language-modelsinference-time-controlimplicit-hate-speech

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